Files in tutorial_input_files.zip necessary to reproduce the results in Fig. 2 and Fig. 3 of the main text. By executing the command ./FIG2_3.sh (or ./FIG2_3.sh X, with X the number of parallel processes), all the results in Fig. 2 and Fig. 3 can be obtained and the figure can be plotted.
The background colors indicate folders (green), input files (purple), executables (yellow), and explanations (white). Here, SSI is short for single-shot images. The input files can be downloaded at http://ultracold.org/data/tutorial_input_files.zip.